Integrative functional genomic analysis of human brain development and neuropsychiatric risks

Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li
American Association for the Advancement of Science (AAAS)
Published 2018

Publication Date:	2018-12-14
Publisher:	American Association for the Advancement of Science (AAAS)
Print ISSN:	0036-8075
Electronic ISSN:	1095-9203
Topics:	Biology Chemistry and Pharmacology Geosciences Computer Science Medicine Natural Sciences in General Physics
Keywords:	Neuroscience, Online Only
Published by:	http://www.aaas.org/

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_version_	1836399104716963841
autor	Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li
beschreibung	To broaden our understanding of human neurodevelopment, we profiled transcriptomic and epigenomic landscapes across brain regions and/or cell types for the entire span of prenatal and postnatal development. Integrative analysis revealed temporal, regional, sex, and cell type–specific dynamics. We observed a global transcriptomic cup-shaped pattern, characterized by a late fetal transition associated with sharply decreased regional differences and changes in cellular composition and maturation, followed by a reversal in childhood-adolescence, and accompanied by epigenomic reorganizations. Analysis of gene coexpression modules revealed relationships with epigenomic regulation and neurodevelopmental processes. Genes with genetic associations to brain-based traits and neuropsychiatric disorders (including MEF2C , SATB2 , SOX5 , TCF4 , and TSHZ3 ) converged in a small number of modules and distinct cell types, revealing insights into neurodevelopment and the genomic basis of neuropsychiatric risks.
citation_standardnr	6369580
datenlieferant	ipn_articles
feed_id	25
feed_publisher	American Association for the Advancement of Science (AAAS)
feed_publisher_url	http://www.aaas.org/
insertion_date	2018-12-14
journaleissn	1095-9203
journalissn	0036-8075
publikationsjahr_anzeige	2018
publikationsjahr_facette	2018
publikationsjahr_intervall	7984:2015-2019
publikationsjahr_sort	2018
publisher	American Association for the Advancement of Science (AAAS)
quelle	Science
relation	http://science.sciencemag.org/cgi/content/short/362/6420/eaat7615?rss=1
schlagwort	Neuroscience, Online Only
search_space	articles
shingle_author_1	Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li
shingle_author_2	Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li
shingle_author_3	Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li
shingle_author_4	Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li
shingle_catch_all_1	Integrative functional genomic analysis of human brain development and neuropsychiatric risks Neuroscience, Online Only To broaden our understanding of human neurodevelopment, we profiled transcriptomic and epigenomic landscapes across brain regions and/or cell types for the entire span of prenatal and postnatal development. Integrative analysis revealed temporal, regional, sex, and cell type–specific dynamics. We observed a global transcriptomic cup-shaped pattern, characterized by a late fetal transition associated with sharply decreased regional differences and changes in cellular composition and maturation, followed by a reversal in childhood-adolescence, and accompanied by epigenomic reorganizations. Analysis of gene coexpression modules revealed relationships with epigenomic regulation and neurodevelopmental processes. Genes with genetic associations to brain-based traits and neuropsychiatric disorders (including MEF2C , SATB2 , SOX5 , TCF4 , and TSHZ3 ) converged in a small number of modules and distinct cell types, revealing insights into neurodevelopment and the genomic basis of neuropsychiatric risks. Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li American Association for the Advancement of Science (AAAS) 0036-8075 00368075 1095-9203 10959203
shingle_catch_all_2	Integrative functional genomic analysis of human brain development and neuropsychiatric risks Neuroscience, Online Only To broaden our understanding of human neurodevelopment, we profiled transcriptomic and epigenomic landscapes across brain regions and/or cell types for the entire span of prenatal and postnatal development. Integrative analysis revealed temporal, regional, sex, and cell type–specific dynamics. We observed a global transcriptomic cup-shaped pattern, characterized by a late fetal transition associated with sharply decreased regional differences and changes in cellular composition and maturation, followed by a reversal in childhood-adolescence, and accompanied by epigenomic reorganizations. Analysis of gene coexpression modules revealed relationships with epigenomic regulation and neurodevelopmental processes. Genes with genetic associations to brain-based traits and neuropsychiatric disorders (including MEF2C , SATB2 , SOX5 , TCF4 , and TSHZ3 ) converged in a small number of modules and distinct cell types, revealing insights into neurodevelopment and the genomic basis of neuropsychiatric risks. Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li American Association for the Advancement of Science (AAAS) 0036-8075 00368075 1095-9203 10959203
shingle_catch_all_3	Integrative functional genomic analysis of human brain development and neuropsychiatric risks Neuroscience, Online Only To broaden our understanding of human neurodevelopment, we profiled transcriptomic and epigenomic landscapes across brain regions and/or cell types for the entire span of prenatal and postnatal development. Integrative analysis revealed temporal, regional, sex, and cell type–specific dynamics. We observed a global transcriptomic cup-shaped pattern, characterized by a late fetal transition associated with sharply decreased regional differences and changes in cellular composition and maturation, followed by a reversal in childhood-adolescence, and accompanied by epigenomic reorganizations. Analysis of gene coexpression modules revealed relationships with epigenomic regulation and neurodevelopmental processes. Genes with genetic associations to brain-based traits and neuropsychiatric disorders (including MEF2C , SATB2 , SOX5 , TCF4 , and TSHZ3 ) converged in a small number of modules and distinct cell types, revealing insights into neurodevelopment and the genomic basis of neuropsychiatric risks. Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li American Association for the Advancement of Science (AAAS) 0036-8075 00368075 1095-9203 10959203
shingle_catch_all_4	Integrative functional genomic analysis of human brain development and neuropsychiatric risks Neuroscience, Online Only To broaden our understanding of human neurodevelopment, we profiled transcriptomic and epigenomic landscapes across brain regions and/or cell types for the entire span of prenatal and postnatal development. Integrative analysis revealed temporal, regional, sex, and cell type–specific dynamics. We observed a global transcriptomic cup-shaped pattern, characterized by a late fetal transition associated with sharply decreased regional differences and changes in cellular composition and maturation, followed by a reversal in childhood-adolescence, and accompanied by epigenomic reorganizations. Analysis of gene coexpression modules revealed relationships with epigenomic regulation and neurodevelopmental processes. Genes with genetic associations to brain-based traits and neuropsychiatric disorders (including MEF2C , SATB2 , SOX5 , TCF4 , and TSHZ3 ) converged in a small number of modules and distinct cell types, revealing insights into neurodevelopment and the genomic basis of neuropsychiatric risks. Li, M., Santpere, G., Imamura Kawasawa, Y., Evgrafov, O. V., Gulden, F. O., Pochareddy, S., Sunkin, S. M., Li, Z., Shin, Y., Zhu, Y., Sousa, A. M. M., Werling, D. M., Kitchen, R. R., Kang, H. J., Pletikos, M., Choi, J., Muchnik, S., Xu, X., Wang, D., Lorente-Galdos, B., Liu, S., Giusti-Rodriguez, P., Won, H., de Leeuw, C. A., Pardinas, A. F., Brain; Span Consortium, Psych; ENCODE Consortium, Psych; ENCODE Developmental Subgroup, Hu, M., Jin, F., Li, Y., Owen, M. J., ODonovan, M. C., Walters, J. T. R., Posthuma, D., Levitt, P., Weinberger, D. R., Hyde, T. M., Kleinman, J. E., Geschwind, D. H., Hawrylycz, M. J., State, M. W., Sanders, S. J., Sullivan, P. F., Gerstein, M. B., Lein, E. S., Knowles, J. A., Sestan, N., Willsey, Oldre, Szafer, Camarena, Cherskov, Charney, Abyzov, Kozlenkov, Safi, Jones, Ashley-Koch, Ebbert, Price, Sekijima, Kefi, Bernard, Amiri, Sboner, Clark, Jaffe, Tebbenkamp, Sodt, Guillozet-Bongaarts, Nairn, Carey, Huttner, Chervenak, Szekely, Shieh, Harmanci, Lipska, Carlyle, Gregor, Kassim, Sheppard, Bichsel, Hahn, Lee, Chen, Kuan, Dang, Lau, Cuhaciyan, Armoskus, Mason, Liu, Slaughterbeck, Bennet, Pinto, Polioudakis, Franjic, Miller, Bertagnolli, Lewis, Feng, Sandman, Clarke, Williams, Del; Valle, Fitzgerald, Shen, Flatow, Zharovsky, Burke, Olson, Fulfs, Mattei, Hadjimichael, Deelman, Navarro, Wu, Lee, Cheng, Goes, Vaccarino, Liu, Hoffman, Gürsoy, Gee, Mehta, Coppola, Giase, Sedmak, Johnson, Wray, Crawford, Gu, van Bakel, Witt, Yoon, Pratt, Zhao, Glass, Huey, Arnold, Noonan, Bendl, Jochim, Goldy, Herstein, Wiseman, Miller, Mariani, Stoll, Moore, Szatkiewicz, Leng, Zhang, Parente, Rozowsky, Fullard, Hohmann, Morris, Phillips, Warrell, Shin, An, Belmont, Nyhus, Pendergraft, Bryois, Roll, Grennan, Aiona, White, Aldinger, Smith, Girdhar, Brouner, Mangravite, Brown, Collado-Torres, Cheng, Gourley, Song, Ubieta, Habegger, Ng, Hauberg, Onorati, Webster, Kundakovic, Skarica, Reimers, Johnson, Chen, Garrett, Sarreal, Reding, Gu, Peters, Fisher, Gandal, Purcaro, Smith, Brown, Shibata, Brown, Xu, Yang, Ray, Shapovalova, Francoeur, Sjoquist, Mastan, Kaur, Parikshak, Mosqueda, Ngo, Dee, Ivanov, Devillers, Roussos, Parker, Manser, Wohnoutka, Farnham, Zandi, Emani, Dalley, Mayani, Tao, Gittin, Straub, Lifton, Jacobov, Howard, Park, Dai, Abramowicz, Akbarian, Schreiner, Ma, Parry, Shapouri, Weissman, Caldejon, Mane, Ding, Scuderi, Dracheva, Butler, Lisgo, Rhie, Lindsay, Datta, Souaiaia, Roychowdhury, Gomez, Naluai-Cecchini, Beach, Goodman, Gao, Dolbeare, Fliss, Reddy, Chen, Hyde, Brunetti, Lemon, Desta, Borrman, Haroutunian, Spitsyna, Swarup, Shi, Jiang, Xia, Chen, Jiang, Wang, Chae, Yang, Kim, Riley, Krsnik, Deng, Weng, Lin, Li American Association for the Advancement of Science (AAAS) 0036-8075 00368075 1095-9203 10959203
shingle_title_1	Integrative functional genomic analysis of human brain development and neuropsychiatric risks
shingle_title_2	Integrative functional genomic analysis of human brain development and neuropsychiatric risks
shingle_title_3	Integrative functional genomic analysis of human brain development and neuropsychiatric risks
shingle_title_4	Integrative functional genomic analysis of human brain development and neuropsychiatric risks
timestamp	2025-06-30T23:37:40.373Z
titel	Integrative functional genomic analysis of human brain development and neuropsychiatric risks
titel_suche	Integrative functional genomic analysis of human brain development and neuropsychiatric risks
topic	W V TE-TZ SQ-SU WW-YZ TA-TD U
uid	ipn_articles_6369580