Search Results - (Author, Cooperation:M. Davey)
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1M. Babu ; J. Vlasblom ; S. Pu ; X. Guo ; C. Graham ; B. D. Bean ; H. E. Burston ; F. J. Vizeacoumar ; J. Snider ; S. Phanse ; V. Fong ; Y. Y. Tam ; M. Davey ; O. Hnatshak ; N. Bajaj ; S. Chandran ; T. Punna ; C. Christopolous ; V. Wong ; A. Yu ; G. Zhong ; J. Li ; I. Stagljar ; E. Conibear ; S. J. Wodak ; A. Emili ; J. F. Greenblatt
Nature Publishing Group (NPG)
Published 2012Staff ViewPublication Date: 2012-09-04Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Cell Membrane/chemistry/metabolism ; Chitin Synthase/metabolism ; Detergents ; Endoplasmic Reticulum/metabolism ; Golgi Apparatus/metabolism ; Mass Spectrometry ; Membrane Proteins/analysis/chemistry/*metabolism ; Protein Binding ; Protein Interaction Mapping ; *Protein Interaction Maps ; Proteome/analysis/chemistry/metabolism ; Saccharomyces cerevisiae/chemistry/cytology/*metabolism ; Saccharomyces cerevisiae Proteins/analysis/chemistry/*metabolismPublished by: -
2G. J. Edgar ; R. D. Stuart-Smith ; T. J. Willis ; S. Kininmonth ; S. C. Baker ; S. Banks ; N. S. Barrett ; M. A. Becerro ; A. T. Bernard ; J. Berkhout ; C. D. Buxton ; S. J. Campbell ; A. T. Cooper ; M. Davey ; S. C. Edgar ; G. Forsterra ; D. E. Galvan ; A. J. Irigoyen ; D. J. Kushner ; R. Moura ; P. E. Parnell ; N. T. Shears ; G. Soler ; E. M. Strain ; R. J. Thomson
Nature Publishing Group (NPG)
Published 2014Staff ViewPublication Date: 2014-02-07Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Animals ; Aquatic Organisms/physiology ; Biodiversity ; Biomass ; Conservation of Natural Resources/economics/legislation & ; jurisprudence/methods/*statistics & numerical data ; Coral Reefs ; Ecology/economics/legislation & jurisprudence/methods/*statistics & numerical ; data ; *Ecosystem ; Fisheries/legislation & jurisprudence/standards/*statistics & numerical data ; Fishes/*physiology ; Marine Biology/economics/legislation & jurisprudence/methods/statistics & ; numerical data ; Seawater ; Sharks ; Silicon Dioxide ; Time FactorsPublished by: -
3J. M. Rothberg ; W. Hinz ; T. M. Rearick ; J. Schultz ; W. Mileski ; M. Davey ; J. H. Leamon ; K. Johnson ; M. J. Milgrew ; M. Edwards ; J. Hoon ; J. F. Simons ; D. Marran ; J. W. Myers ; J. F. Davidson ; A. Branting ; J. R. Nobile ; B. P. Puc ; D. Light ; T. A. Clark ; M. Huber ; J. T. Branciforte ; I. B. Stoner ; S. E. Cawley ; M. Lyons ; Y. Fu ; N. Homer ; M. Sedova ; X. Miao ; B. Reed ; J. Sabina ; E. Feierstein ; M. Schorn ; M. Alanjary ; E. Dimalanta ; D. Dressman ; R. Kasinskas ; T. Sokolsky ; J. A. Fidanza ; E. Namsaraev ; K. J. McKernan ; A. Williams ; G. T. Roth ; J. Bustillo
Nature Publishing Group (NPG)
Published 2011Staff ViewPublication Date: 2011-07-22Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Escherichia coli/genetics ; Genome, Bacterial/*genetics ; Genome, Human/*genetics ; Genomics/*instrumentation/*methods ; Humans ; Light ; Male ; Rhodopseudomonas/genetics ; *Semiconductors ; Sequence Analysis, DNA/*instrumentation/*methods ; Vibrio/geneticsPublished by: -
4Staff View
Publication Date: 2018-08-17Publisher: American Association for the Advancement of Science (AAAS)Print ISSN: 0036-8075Electronic ISSN: 1095-9203Topics: BiologyChemistry and PharmacologyGeosciencesComputer ScienceMedicineNatural Sciences in GeneralPhysicsKeywords: Botany, Online OnlyPublished by: -
5Staff View
Publication Date: 2018-08-17Publisher: American Association for the Advancement of Science (AAAS)Print ISSN: 0036-8075Electronic ISSN: 1095-9203Topics: BiologyChemistry and PharmacologyGeosciencesComputer ScienceMedicineNatural Sciences in GeneralPhysicsKeywords: Botany, Ecology, Online OnlyPublished by: -
6Napier, R. J., Lee, E. J., Vance, E. E., Snow, P. E., Samson, K. A., Dawson, C. E., Moran, A. E., Stenzel, P., Davey, M. P., Sakaguchi, S., Rosenzweig, H. L.
The American Association of Immunologists (AAI)
Published 2018Staff ViewPublication Date: 2018-09-18Publisher: The American Association of Immunologists (AAI)Print ISSN: 0022-1767Electronic ISSN: 1550-6606Topics: MedicinePublished by: -
7Sripaoraya, S. ; Blackhall, N. W. ; Marchant, R. ; Power, J. B. ; Lowe, K. C. ; Davey, M. R.
Oxford, UK : Blackwell Publishing Ltd
Published 2001Staff ViewISSN: 1439-0523Source: Blackwell Publishing Journal Backfiles 1879-2005Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, NutritionNotes: Random amplified polymorphic DNA (RAPD) analysis was applied to eight commercial cultivars of pineapple, two intergroup hybrids and two wild species. Morphologically, pineapple is divided into the Cayenne, Queen, Spanish, Maipure and Abacaxi groups. Members of the first three groups have been analysed in this study. The cultivars ‘Tradsithong’, ‘Phuket’, ‘Sawee’ and ‘Tainan’, with spiny leaves, form the Queen group. In ‘Pattavia’, ‘Nanglae’ and ‘Petburi no. 2’ (Cayenne group), spines are confined to the leaf tips. ‘Intrachitdang’ is normally placed in the Spanish group, which is morphologically similar to the Queen group, but with inferior quality fruit. DNA amplification products were compared from 16 arbitrary 10-mer primers from which a dendrogram was constructed. The results confirmed morphological classifications for seven of the eight commercial cultivars, with the Queen and Cayenne groups as separate clusters. However, the cv. ‘Intrachitdang’ was more closely related to the Cayenne group. Two hybrids from reciprocal Cayenne × Queen group crosses, were more closely allied to the Queen group. The two wild species were outside the groups. RAPD analysis can be exploited to investigate relationships within pineapple germplasm.Type of Medium: Electronic ResourceURL: -
8Staff View
ISSN: 1439-0523Source: Blackwell Publishing Journal Backfiles 1879-2005Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, NutritionNotes: Knowledge of the genetic relationships among landraces is useful to gene bank managers because it permits a better organization of the crop's gene pool management, more efficient sampling of the available germplasm resources and better access to useful genetic variation for breeders. Genetic diversity of 19 landraces of the cultivated mung bean, Vigna radiate, and three weedy and wild relatives including Vigna mungo, Vigna luteola and Vigna radiate var. sublobata, was investigated at the DNA level with the random amplified polymorphic DNA (RAPD) procedure. Sixty random decamer primers were employed in amplification reactions; 28 of these were informative and yielded 246 bands, of which 229 were polymorphic with a mean of 8.2 bands per primer. A genetic distance matrix based on Nei and Li coefficient was converted to a dendrogram and a two-dimensional plot using multidimensional scaling (MDS). The accessions studied were separated into three main clusters, which included V. radiate landraces, V. mungo and V. luteola, respectively. The variation of this cluster supports the view that the genetic distance of V. mungo and V. luteola varies considerably from the accession VO2955 (V. radiata). The multidimensional scaling plot confirmed that V. mungo, V. luteola and most of the accessions of V. radiata formed distinct clusters with no overlap, and two mung bean accessions (PI177493 and VO4134–1 from Turkey and India, respectively) were genetically distant from other V. radiata landraces. V. radiata and V. mungo are positioned in separate botanical species and V. radiata var. sublobata is classified within other V. radiata landraces. Based on the limited range of accessions tested, the approach holds promise for the classification of mung bean germplasm, identification of mung bean landraces and applications of molecular markers to mung bean breeding.Type of Medium: Electronic ResourceURL: -
9Webster, G. ; Jain, V. ; Davey, M. R. ; Gough, C. ; Vasse, J. ; Dénarié, J. ; Cocking, E. C.
Oxford, UK : Blackwell Publishing Ltd
Published 1998Staff ViewISSN: 1365-3040Source: Blackwell Publishing Journal Backfiles 1879-2005Topics: BiologyNotes: We have studied intercellular colonization of wheat roots by Azorhizobium caulinodans and other diazotrophic bacteria, using strains marked with the lacZ reporter gene to facilitate their detection and identification. A. caulinodans was observed by light and electron microscopy to enter the roots of wheat at high frequency at the points of emergence of lateral roots (lateral root cracks). After lateral root crack colonization, bacteria moved into intercellular spaces within the cortical cell layer of roots. The flavonoid naringenin at 10 and 100 mmol m–3 significantly stimulated root colonization. The roles of the structural nodABC genes and the regulatory nodD gene were also studied; lateral root crack colonization of wheat was shown to be Nod factor- and NodD-independent. Similar frequencies of lateral root crack colonization were observed following inoculation of wheat with Azospirillum brasilense. Colonization by A. brasilense was stimulated by naringenin and also by other flavonoid molecules.Type of Medium: Electronic ResourceURL: -
10SAVOURÉ, A. ; THORIN, D. ; DAVEY, M. ; HUA, XUE-JUN ; MAURO, S. ; VAN MONTAGU, M. ; INZÉ, D. ; VERBRUGGEN, N.
Oxford, UK : Blackwell Publishing Ltd
Published 1999Staff ViewISSN: 1365-3040Source: Blackwell Publishing Journal Backfiles 1879-2005Topics: BiologyNotes: To gain better insights into the generation of oxidative stress by NaCl stress, we compared the effects of toxic, sublethal concentrations of NaCl (150 mM) with those of CuSO4 (100 μM) on the antioxidant defence responses of Nicotiana plumbaginifolia L. plants grown in hydroponic culture. Short- and long-term adaptive responses were investigated as well as the effects of root cutting to allow rapid absorption of ions. Our results show that photosynthesis is already affected after 12 h of both treatments and that photoinhibition is induced. Furthermore, the two treatments showed distinct patterns of induction of the genes of the antioxidant systems. Principally, NaCl stimulated catalase activity through activation of the Cat2 and Cat3 genes, whereas with CuSO4, transcript levels, protein levels, and enzymatic activities of glutathione peroxidase, ascorbate peroxidase, and superoxide dismutase were differentially induced. The antioxidants ascorbate and glutathione were found to be largely oxidized after 12 h, suggesting an inability of the recycling process to cope with the stress. In addition, both NaCl and CuSO4 treatments stimulated the accumulation of the osmolyte proline. Therefore, we conclude that the uptake and accumulation of different types of ions lead to the generation of distinct antioxidant responses in N. plumbaginifolia.Type of Medium: Electronic ResourceURL: -
11Staff View
ISSN: 1365-3040Source: Blackwell Publishing Journal Backfiles 1879-2005Topics: BiologyNotes: A comprehensive study was carried out to examine the interactions between the two major hydrophilic antioxidants l-ascorbate (vitamin C, l-AA), and glutathione (γ-glutamyl cysteinylglycine, GSH), and other antioxidant pools in tissues of Malus, to identify factors affecting steady-state cellular concentrations. We show that in Malus, each tissue type has a characteristic and different l-AA/GSH ratio and that in fruit, exocarp (epidermal) tissue acclimated to high light has higher l-AA levels but lower GSH levels than shaded (green) areas. Maturing seeds were characterized by the highest concentrations of GSH and a highly oxidized l-AA pool. It is demonstrated that fruit seeds are capable of l-AA biosynthesis, but that this occurs exclusively by means of the Smirnoff–Wheeler pathway. By contrast, foliar tissue was also able to synthesize l-AA using uronic acid substrates. Unlike the fruit of some other plant species however, the remaining fruit tissues are incapable of de novol-AA biosynthesis. The observed differences in the steady-state concentrations of l-AA and GSH and the capacity to withstand stress in fruit, were also independent of the rates of uptake of photosynthate or of l-AA, but were correlated with the protective effect provided by phenolic compounds in these tissues. During development and maturation, l-AA and GSH levels in apple fruit declined steadily while foliar levels remained essentially constant throughout. However there was no apparent relationship between the free sugar contents of the fruit and antioxidant concentrations.Type of Medium: Electronic ResourceURL: -
12Paul, R. S. ; Latif, M. ; D'Utra Vaz, F. B. ; Davey, M. R. ; Power, J. B.
Oxford, UK : Blackwell Publishing Ltd
Published 1993Staff ViewISSN: 1439-0523Source: Blackwell Publishing Journal Backfiles 1879-2005Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, NutritionNotes: Two hexaploid somatic hybrids [Sh; L. esculentum (+) L. Peruvianum] accessions 6 and 18 were back-crossed with two diploid L. Esculentum cultivars ‘Moneymaker’ (mm) and ‘pusa Ruby’ (pr). Twenty-two plants of the bc2 generation were produced by backcrossing 7 bcl plants (mm x sh, 6, 18) with five tomato cultivars. Fourteen of the bc2 plants were self-fertile, five produced anther cones with anthocyanin pigmentation not present in the parents. A bc3 generation was developed by crossing the four cultivars as female parent with three bc2 generation plants. The bc3 progeny derived from one pollen parent plant were produced without the need to culture immature seeds. They segregated with respect to pigmented anther cones and were self-fertile. The anther cone pigmentation of the pollen parent plant was associated with increased seed set, greater fruit size and an orange-red fruit colour. These features were transmitted to the fertile bc3 generation. Conversely, bc3 offspring involving the other two parent plants were only recovered by culture of immature seeds. The recovery of diploid plants in BCl and self-fertility in BC2 resulted in almost total recovery of the tomato cultivar characteristics (fruit size, colour and number of seeds) by BC3.Type of Medium: Electronic ResourceURL: -
13Weinberg, A.D. ; Bourdette, D.N. ; Sullivan, T.J. ; Lemon, M. ; Wallin, J.J. ; Maziarz, R. ; Davey, M. ; Palida, F. ; Godfrey, W. ; Engleman, E. ; Fulton, R.J. ; Offner, H. ; Vandenbark, A.A.
[s.l.] : Nature Publishing Group
Published 1996Staff ViewISSN: 1546-170XSource: Nature Archives 1869 - 2009Topics: BiologyMedicineNotes: [Auszug] The OX–40 protein was selectively upregulated on encephalitogenic myelin basic protein (MBP)–specific T cells at the site of inflammation during the onset of experimental autoimmune encephalomyelitis (EAE). An OX–40 immunotoxin was used to target and eliminate MBP–specific T ...Type of Medium: Electronic ResourceURL: -
14Cocking, E. C. ; Davey, M. R. ; Pental, D. ; Power, J. B.
[s.l.] : Nature Publishing Group
Published 1981Staff ViewISSN: 1476-4687Source: Nature Archives 1869 - 2009Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsNotes: [Auszug] The use of molecular and somatic genetics in plant breeding should facilitate the selection and enhancement of the production of plants with desirable characteristics. However, such techniques are still very much at the experimental stage and several major drawbacks must be overcome before they can ...Type of Medium: Electronic ResourceURL: -
15AHKONG, Q. F. ; HOWELL, J. ISOBEL ; LUCY, J. A. ; SAFWAT, F. ; DAVEY, M. R. ; COCKING, E. C.
[s.l.] : Nature Publishing Group
Published 1975Staff ViewISSN: 1476-4687Source: Nature Archives 1869 - 2009Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsNotes: [Auszug] Hen erythrocytes (Fig. Id) and yeast protoplasts (Fig. \b) were mixed in the cell ratios 1:250, 1:50, 1:10, 1:1 and 10:1, erythrocytes:protoplasts (approximately 6xl08 cells in total). An appropriate volume of the protoplast preparation was centrifuged (1,000# for 3 min) and the supernatant ...Type of Medium: Electronic ResourceURL: -
16MENCO, B. P. M. ; DODD, G. H. ; DAVEY, M. ; BANNISTER, L. H.
[s.l.] : Nature Publishing Group
Published 1976Staff ViewISSN: 1476-4687Source: Nature Archives 1869 - 2009Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsNotes: [Auszug] Fig. 1 Freeze-etch replica of the surface of the bovine olfactory epithelium showing two receptor endings (re) and the apex of a supporting cell (sc). Note the broken basal portions of cilia at the surface of the sensory ending on the right, and two vertically cleaved cilia on the left (x 25,000). ...Type of Medium: Electronic ResourceURL: -
17Staff View
ISSN: 1476-4687Source: Nature Archives 1869 - 2009Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsNotes: [Auszug] Platelet aggregation in vivo has been shown to follow the application of solutions of ADP to injured cerebral blood vessels of rabbits7. In intact animals, intravenous infusions of ADP were found to lower the platelet count transiently in cats8 and in rabbits9. The lowest concentration of ADP in ...Type of Medium: Electronic ResourceURL: -
18Staff View
ISSN: 1476-4687Source: Nature Archives 1869 - 2009Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsNotes: [Auszug] RECENTLY, Nahas, Denson and Macfarlane1 reported details of the coagulant actions of eight viper venoms. We have examined effects of six of these on washed human blood platelets. These actions on platelets were compared with those of thrombin, which is believed to be a principal agent in the ...Type of Medium: Electronic ResourceURL: -
19DAVEY, M. J. ; DAVIES, R. F. ; REINERT, H. ; SCHOLFIELD, P. C.
[s.l.] : Nature Publishing Group
Published 1965Staff ViewISSN: 1476-4687Source: Nature Archives 1869 - 2009Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsNotes: [Auszug] EMMELIN and Engstrom1 reported that bretylium caused salivation in the submaxillary gland of the cat as a result of its muscarinic properties. They found that bretylium was without effect on the secretion of saliva and the vasodilatation evoked by electrical stimulation of the chorda tympani nerve. ...Type of Medium: Electronic ResourceURL: -
20The analysis of underivatised oligosaccharides by Matrix-Assisted Laser Desorption Mass SpectrometryStaff View
ISSN: 0006-291XSource: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002Topics: BiologyChemistry and PharmacologyPhysicsType of Medium: Electronic ResourceURL: