Search Results - (Author, Cooperation:J. Dekker)
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1Latest Papers from Table of Contents or Articles in PressShalenie P. den Braver-Sewradj, Michiel W. den Braver, Robin M. Toorneman, Stephanie van Leeuwen, Yongjie Zhang, Stefan J. Dekker, Nico P. E. Vermeulen, Jan N. M. Commandeur and J. Chris Vos
American Chemical Society (ACS)
Published 2018Staff ViewPublication Date: 2018-01-12Publisher: American Chemical Society (ACS)Print ISSN: 0893-228XElectronic ISSN: 1520-5010Topics: MedicinePublished by: -
2Latest Papers from Table of Contents or Articles in PressE. Crane ; Q. Bian ; R. P. McCord ; B. R. Lajoie ; B. S. Wheeler ; E. J. Ralston ; S. Uzawa ; J. Dekker ; B. J. Meyer
Nature Publishing Group (NPG)
Published 2015Staff ViewPublication Date: 2015-06-02Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Adenosine Triphosphatases/*metabolism ; Animals ; Caenorhabditis elegans/*genetics/*metabolism ; Caenorhabditis elegans Proteins/genetics/*metabolism ; DNA-Binding Proteins/*metabolism ; Dosage Compensation, Genetic/genetics/*physiology ; Female ; Gene Expression Regulation ; In Situ Hybridization, Fluorescence ; Male ; Multiprotein Complexes/*metabolism ; Protein Binding ; Sequence Analysis, RNA ; X Chromosome/genetics/*metabolismPublished by: -
3Latest Papers from Table of Contents or Articles in PressK. C. Wang ; Y. W. Yang ; B. Liu ; A. Sanyal ; R. Corces-Zimmerman ; Y. Chen ; B. R. Lajoie ; A. Protacio ; R. A. Flynn ; R. A. Gupta ; J. Wysocka ; M. Lei ; J. Dekker ; J. A. Helms ; H. Y. Chang
Nature Publishing Group (NPG)
Published 2011Staff ViewPublication Date: 2011-03-23Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Animals ; Cell Line ; Cells, Cultured ; Chromatin/*genetics/metabolism ; DNA, Intergenic/genetics ; Embryo, Mammalian/metabolism ; Fibroblasts/metabolism ; Gene Expression Regulation, Developmental/*genetics ; Gene Knockdown Techniques ; Genes, Homeobox/*genetics ; Histone-Lysine N-Methyltransferase/metabolism ; Histones/chemistry/metabolism ; Humans ; Lysine/metabolism ; Methylation ; Mice ; Molecular Sequence Data ; Multigene Family/genetics ; Organ Specificity ; RNA, Untranslated/*genetics ; Transcription, GeneticPublished by: -
4Latest Papers from Table of Contents or Articles in PressN. Naumova ; M. Imakaev ; G. Fudenberg ; Y. Zhan ; B. R. Lajoie ; L. A. Mirny ; J. Dekker
American Association for the Advancement of Science (AAAS)
Published 2013Staff ViewPublication Date: 2013-11-10Publisher: American Association for the Advancement of Science (AAAS)Print ISSN: 0036-8075Electronic ISSN: 1095-9203Topics: BiologyChemistry and PharmacologyComputer ScienceMedicineNatural Sciences in GeneralPhysicsKeywords: Biopolymers/chemistry ; Cell Cycle/genetics ; Chromatin/chemistry ; Chromosomes, Human, Pair 21/*chemistry ; HeLa Cells ; Humans ; Metaphase/genetics ; Mitosis/*genetics ; Models, ChemicalPublished by: -
5Latest Papers from Table of Contents or Articles in PressD. Hnisz ; A. S. Weintraub ; D. S. Day ; A. L. Valton ; R. O. Bak ; C. H. Li ; J. Goldmann ; B. R. Lajoie ; Z. P. Fan ; A. A. Sigova ; J. Reddy ; D. Borges-Rivera ; T. I. Lee ; R. Jaenisch ; M. H. Porteus ; J. Dekker ; R. A. Young
American Association for the Advancement of Science (AAAS)
Published 2016Staff ViewPublication Date: 2016-03-05Publisher: American Association for the Advancement of Science (AAAS)Print ISSN: 0036-8075Electronic ISSN: 1095-9203Topics: BiologyChemistry and PharmacologyComputer ScienceMedicineNatural Sciences in GeneralPhysicsKeywords: *Chromosome Aberrations ; Chromosome Mapping ; *Gene Expression Regulation, Leukemic ; HEK293 Cells ; Humans ; Mutation ; Precursor T-Cell Lymphoblastic Leukemia-Lymphoma/*genetics ; Proto-Oncogenes/*genetics ; *Sequence Deletion ; Transcriptional Activation ; *Translocation, GeneticPublished by: -
6Latest Papers from Table of Contents or Articles in PressStaff View
Publication Date: 2013-09-27Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Animals ; Chromosomes/*chemistry ; *Genetic Techniques ; Male ; *Models, MolecularPublished by: -
7Latest Papers from Table of Contents or Articles in PressG. Moissiard ; S. J. Cokus ; J. Cary ; S. Feng ; A. C. Billi ; H. Stroud ; D. Husmann ; Y. Zhan ; B. R. Lajoie ; R. P. McCord ; C. J. Hale ; W. Feng ; S. D. Michaels ; A. R. Frand ; M. Pellegrini ; J. Dekker ; J. K. Kim ; S. E. Jacobsen
American Association for the Advancement of Science (AAAS)
Published 2012Staff ViewPublication Date: 2012-05-05Publisher: American Association for the Advancement of Science (AAAS)Print ISSN: 0036-8075Electronic ISSN: 1095-9203Topics: BiologyChemistry and PharmacologyComputer ScienceMedicineNatural Sciences in GeneralPhysicsKeywords: Adenosine Triphosphatases/chemistry/genetics/*metabolism ; Animals ; Arabidopsis/enzymology/*genetics/*metabolism ; Arabidopsis Proteins/chemistry/genetics/*metabolism ; Caenorhabditis elegans ; Caenorhabditis elegans Proteins/genetics/metabolism ; Centromere ; DNA Methylation ; DNA Transposable Elements ; *Gene Silencing ; Genes, Plant ; Heterochromatin/*metabolism/ultrastructure ; Histones/metabolism ; Methylation ; Mutation ; RNA, Small Interfering/metabolism ; Transcription, Genetic ; Transgenes ; Up-RegulationPublished by: -
8Latest Papers from Table of Contents or Articles in PressT. Mizuguchi ; G. Fudenberg ; S. Mehta ; J. M. Belton ; N. Taneja ; H. D. Folco ; P. FitzGerald ; J. Dekker ; L. Mirny ; J. Barrowman ; S. I. Grewal
Nature Publishing Group (NPG)
Published 2014Staff ViewPublication Date: 2014-10-14Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Cell Cycle Proteins/*metabolism ; Chromosomal Proteins, Non-Histone/*metabolism ; *Genome, Fungal ; Heterochromatin/*metabolism ; Molecular Conformation ; Schizosaccharomyces/genetics/*physiology ; Schizosaccharomyces pombe Proteins/*metabolismPublished by: -
9Latest Papers from Table of Contents or Articles in PressR. E. Thurman ; E. Rynes ; R. Humbert ; J. Vierstra ; M. T. Maurano ; E. Haugen ; N. C. Sheffield ; A. B. Stergachis ; H. Wang ; B. Vernot ; K. Garg ; S. John ; R. Sandstrom ; D. Bates ; L. Boatman ; T. K. Canfield ; M. Diegel ; D. Dunn ; A. K. Ebersol ; T. Frum ; E. Giste ; A. K. Johnson ; E. M. Johnson ; T. Kutyavin ; B. Lajoie ; B. K. Lee ; K. Lee ; D. London ; D. Lotakis ; S. Neph ; F. Neri ; E. D. Nguyen ; H. Qu ; A. P. Reynolds ; V. Roach ; A. Safi ; M. E. Sanchez ; A. Sanyal ; A. Shafer ; J. M. Simon ; L. Song ; S. Vong ; M. Weaver ; Y. Yan ; Z. Zhang ; B. Lenhard ; M. Tewari ; M. O. Dorschner ; R. S. Hansen ; P. A. Navas ; G. Stamatoyannopoulos ; V. R. Iyer ; J. D. Lieb ; S. R. Sunyaev ; J. M. Akey ; P. J. Sabo ; R. Kaul ; T. S. Furey ; J. Dekker ; G. E. Crawford ; J. A. Stamatoyannopoulos
Nature Publishing Group (NPG)
Published 2012Staff ViewPublication Date: 2012-09-08Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Chromatin/*genetics/*metabolism ; DNA/*genetics ; DNA Footprinting ; DNA Methylation ; DNA-Binding Proteins/metabolism ; Deoxyribonuclease I/metabolism ; *Encyclopedias as Topic ; Evolution, Molecular ; Genome, Human/*genetics ; Genomics ; Humans ; *Molecular Sequence Annotation ; Mutation Rate ; Promoter Regions, Genetic/genetics ; Regulatory Sequences, Nucleic Acid/*genetics ; Transcription Factors/metabolism ; Transcription Initiation Site ; Transcription, GeneticPublished by: -
10Latest Papers from Table of Contents or Articles in PressE. P. Nora ; B. R. Lajoie ; E. G. Schulz ; L. Giorgetti ; I. Okamoto ; N. Servant ; T. Piolot ; N. L. van Berkum ; J. Meisig ; J. Sedat ; J. Gribnau ; E. Barillot ; N. Bluthgen ; J. Dekker ; E. Heard
Nature Publishing Group (NPG)
Published 2012Staff ViewPublication Date: 2012-04-13Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Animals ; Cell Differentiation ; DNA, Intergenic/genetics ; Embryonic Stem Cells/cytology/metabolism ; Epigenesis, Genetic ; Epigenomics ; Female ; Fibroblasts ; Gene Expression Regulation ; Histones/metabolism ; In Situ Hybridization, Fluorescence ; Male ; Methylation ; Mice ; Molecular Sequence Data ; Promoter Regions, Genetic/genetics ; RNA, Long Noncoding ; RNA, Untranslated/*genetics ; Transcriptome ; X Chromosome/chemistry/*genetics ; X Chromosome Inactivation/*geneticsPublished by: -
11Latest Papers from Table of Contents or Articles in PressStaff View
Publication Date: 2012-09-08Publisher: Nature Publishing Group (NPG)Print ISSN: 0028-0836Electronic ISSN: 1476-4687Topics: BiologyChemistry and PharmacologyMedicineNatural Sciences in GeneralPhysicsKeywords: Cell Cycle Proteins/metabolism ; Chromatin/chemistry/genetics/metabolism ; Chromosomal Proteins, Non-Histone/metabolism ; Chromosomes, Human/chemistry/genetics/metabolism ; DNA/*genetics ; *Encyclopedias as Topic ; Enhancer Elements, Genetic/genetics ; Gene Expression Profiling ; Genome, Human/*genetics ; Genomics ; HeLa Cells ; Humans ; K562 Cells ; *Molecular Sequence Annotation ; *Nucleic Acid Conformation ; Promoter Regions, Genetic/*genetics ; Regulatory Sequences, Nucleic Acid/*genetics ; Repressor Proteins/metabolismPublished by: -
12Articles: DFG German National LicensesHoestra, H. ; Dekker, J. ; Wieringa-Brants, D. H. ; Boerema, G. H. ; Gams, W. ; Dijkstra, J. ; Bos, L.
Springer
Published 1972Staff ViewISSN: 1573-8469Source: Springer Online Journal Archives 1860-2000Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, NutritionType of Medium: Electronic ResourceURL: -
13Articles: DFG German National LicensesDekker, T. G. ; Pachler, K. G. R. ; Wessels, P. L. ; Dekker, J. ; Dekker, J. J. ; Fourie, L.
Chichester : Wiley-Blackwell
Published 1978Staff ViewISSN: 0030-4921Keywords: Chemistry ; Analytical Chemistry and SpectroscopySource: Wiley InterScience Backfile Collection 1832-2000Topics: Chemistry and PharmacologyNotes: The complete 1H and 13C NMR assignments for 3,6-epoxypentacyclo[6.2.2.02,7.04,10.05,9]dodecane and 3,6-epoxypentacyclo[6.2.1.02,7.04,10.05,9]undecane are reported. The difference between the 1H and 13C chemical shifts and one-bond proton-carbon coupling constants of these two compounds are adequately explained by the difference in the hybridization of the C—H bonds.Additional Material: 1 Ill.Type of Medium: Electronic ResourceURL: -
14Latest Papers from Table of Contents or Articles in PressDriessen, E., Abbass, A. A., Barber, J. P., Connolly Gibbons, M. B., Dekker, J. J. M., Fokkema, M., Fonagy, P., Hollon, S. D., Jansma, E. P., de Maat, S. C. M., Town, J. M., Twisk, J. W. R., Van, H. L., Weitz, E., Cuijpers, P.
BMJ Publishing
Published 2018Staff ViewPublication Date: 2018-02-21Publisher: BMJ PublishingElectronic ISSN: 2044-6055Topics: MedicineKeywords: Open access, Mental healthPublished by: -
15Latest Papers from Table of Contents or Articles in PressGibcus, J. H., Samejima, K., Goloborodko, A., Samejima, I., Naumova, N., Nuebler, J., Kanemaki, M. T., Xie, L., Paulson, J. R., Earnshaw, W. C., Mirny, L. A., Dekker, J.
American Association for the Advancement of Science (AAAS)
Published 2018Staff ViewPublication Date: 2018-02-10Publisher: American Association for the Advancement of Science (AAAS)Print ISSN: 0036-8075Electronic ISSN: 1095-9203Topics: BiologyChemistry and PharmacologyGeosciencesComputer ScienceMedicineNatural Sciences in GeneralPhysicsKeywords: Cell Biology, Molecular Biology, Online OnlyPublished by: -
16Articles: DFG German National LicensesDekker, J. ; Tukiainen, A. ; Xiang, N. ; Orsila, S. ; Saarinen, M. ; Toivonen, M. ; Pessa, M.
[S.l.] : American Institute of Physics (AIP)
Published 1999Staff ViewISSN: 1089-7550Source: AIP Digital ArchiveTopics: PhysicsNotes: Time resolved photoluminescence and deep level transient spectroscopy have been used to monitor the effect of rapid thermal annealing on bulk GaInP and GaInP/AlGaInP quantum wells grown by solid source molecular beam epitaxy similar to those used in 650 nm range lasers. Following rapid thermal annealing at temperatures up to 875 °C, reductions in the concentration of several deep level traps are observed. Correlation of these data with photoluminescent intensity and lifetime measurements indicate that the defect labeled N3, 0.83 eV below the conduction band, is the dominant recombination center. The combination of these two transient spectroscopy measurement techniques is therefore not only able to measure the change in deep level concentration, but also to correlate this change with improved carrier lifetimes and, ultimately, reduced threshold current densities in quantum well lasers. There is also evidence to suggest that this same defect, possibly a phosphorous vacancy or a related complex, plays an important role in other GaInP based devices. © 1999 American Institute of Physics.Type of Medium: Electronic ResourceURL: -
17Articles: DFG German National LicensesStaff View
ISSN: 1089-7550Source: AIP Digital ArchiveTopics: PhysicsNotes: The wind force has been calculated for most of the face-centered-cubic and body-centered-cubic metals of the Periodic Table. Both self-electromigration and impurity migration have been considered. The migration has been treated as the motion of an atom to a neighboring vacancy. The calculations are done using a state-of-the-art code for the electronic structure of a dilute alloy. © 1998 American Institute of Physics.Type of Medium: Electronic ResourceURL: -
18Articles: DFG German National LicensesDekker, J. R. ; Tukiainen, A. ; Jaakkola, R.
Woodbury, NY : American Institute of Physics (AIP)
Published 1998Staff ViewISSN: 1077-3118Source: AIP Digital ArchiveTopics: PhysicsNotes: The majority carrier traps formed in p-GaInP following room temperature irradiation with 3.1 MeV protons have been investigated using deep level transient Fourier spectroscopy. The radiation damage consists of several closely spaced peaks, one of which may have existed in the as-grown material. Energy levels of three of these new traps are reported although in the presence of such closely spaced peaks the energy parameters could only be reliably measured after annealing was used to eliminate shoulder peaks. The spectrum and its annealing behavior are explainable in terms of GaP and InP levels being superimposed. Among the observed peaks, two of the radiation induced levels have been associated with a gallium vacancy defect and a phosphorous Frenkel. © 1998 American Institute of Physics.Type of Medium: Electronic ResourceURL: -
19Articles: DFG German National LicensesBLACKSHAW, R. E. ; ANDERSON, G. W. ; DEKKER, J.
Oxford, UK : Blackwell Publishing Ltd
Published 1987Staff ViewISSN: 1365-3180Source: Blackwell Publishing Journal Backfiles 1879-2005Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, NutritionNotes: Interference of Sinapis arvensis L. (wild mustard) and Chenopodium album L. (lamb's-quarters) in spring rapeseed (Brassica napus L.) was studied under field conditions in 1983 and 1984. Both weed species interfered with rapeseed early in the growing season, causing significant reductions in rapeseed dry weight by June of each year. Sinapis arvensis caused greater rapeseed grain yield reductions than did C. album. With weed densities of 20–80 plants m−2, rapeseed grain yield reductions ranged from 19 to 77% with S. arvensis but only 20 to 25% with C. album. Rapeseed yield reductions caused by mixtures of both weed species ranged from being less than to being equal to the sum of reductions caused by each weed alone, depending on the weed density and year of study. Both weed species were prolific seed producers capable of returning large quantities of seed to the soil. With weed densities ranging from 10–80 plants m−2, S. arvensis produced 5700–30 100 seeds m−2 while C. album produced 3100–63 600 seeds m−2.Type of Medium: Electronic ResourceURL: -
20Articles: DFG German National LicensesStaff View
ISSN: 1365-3180Source: Blackwell Publishing Journal Backfiles 1879-2005Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, NutritionNotes: Three field experiments were conduced to evaluate the effect of Abutilon theophrasti on dry matter, branching and flowering node, and seed production of soybean. Low populations (2.4–4.7 plants m−2) of the weed reduced soybean dry matter, flowering node and seed production. The effect was most pronounced on soybean seed yield, and less on flowering node and dry weight production. These effects were due to the presence of A. theophrasti with soybean, and not to changes in plant population. The effect on soybean branching node production was inconsistent between years.Type of Medium: Electronic ResourceURL: