Search Results - (Author, Cooperation:B. Steuernagel)

Ancient hybridizations among the ancestral genomes of bread wheat

T. Marcussen ; S. R. Sandve ; L. Heier ; M. Spannagl ; M. Pfeifer ; K. S. Jakobsen ; B. B. Wulff ; B. Steuernagel ; K. F. Mayer ; O. A. Olsen
American Association for the Advancement of Science (AAAS)
Published 2014

Shifting the limits in wheat research and breeding using a fully annotated reference genome

The International Wheat Genome Sequencing Consortium (IWGSC), IWGSC Ref; Seq principal investigators:, Appels, R., Eversole, K., Feuillet, C., Keller, B., Rogers, J., Stein, N., IWGSC whole-genome assembly principal investigators:, Pozniak, C. J., Stein, N., Choulet, F., Distelfeld, A., Eversole, K., Poland, J., Rogers, J., Ronen, G., Sharpe, A. G., Whole-genome sequencing and assembly:, Pozniak, C., Ronen, G., Stein, N., Barad, O., Baruch, K., Choulet, F., Keeble-Gagnere, G., Mascher, M., Sharpe, A. G., Ben-Zvi, G., Josselin, A.-A., Hi-C data-based scaffolding:, Stein, N., Mascher, M., Himmelbach, A., Whole-genome assembly quality control and analyses:, Choulet, F., Keeble-Gagnere, G., Mascher, M., Rogers, J., Balfourier, F., Gutierrez-Gonzalez, J., Hayden, M., Josselin, A.-A., Koh, C., Muehlbauer, G., Pasam, R. K., Paux, E., Pozniak, C. J., Rigault, P., Sharpe, A. G., Tibbits, J., Tiwari, V., Pseudomolecule assembly:, Choulet, F., Keeble-Gagnere, G., Mascher, M., Josselin, A.-A., Rogers, J., Ref; Seq genome structure and gene analyses:, Spannagl, M., Choulet, F., Lang, D., Gundlach, H., Haberer, G., Keeble-Gagnere, G., Mayer, K. F. X., Ormanbekova, D., Paux, E., Prade, V., Simkova, H., Wicker, T., Automated annotation:, Choulet, F., Spannagl, M., Swarbreck, D., Rimbert, H., Felder, M., Guilhot, N., Gundlach, H., Haberer, G., Kaithakottil, G., Keilwagen, J., Lang, D., Leroy, P., Lux, T., Mayer, K. F. X., Twardziok, S., Venturini, L., Manual gene curation:, Appels, R., Rimbert, H., Choulet, F., Juhasz, A., Keeble-Gagnere, G., Subgenome comparative analyses:, Choulet, F., Spannagl, M., Lang, D., Abrouk, M., Haberer, G., Keeble-Gagnere, G., Mayer, K. F. X., Wicker, T., Transposable elements:, Choulet, F., Wicker, T., Gundlach, H., Lang, D., Spannagl, M., Phylogenomic analyses:, Lang, D., Spannagl, M., Appels, R., Fischer, I., Transcriptome analyses and RNA-seq data:, Uauy, C., Borrill, P., Ramirez-Gonzalez, R. H., Appels, R., Arnaud, D., Chalabi, S., Chalhoub, B., Choulet, F., Cory, A., Datla, R., Davey, M. W., Hayden, M., Jacobs, J., Lang, D., Robinson, S. J., Spannagl, M., Steuernagel, B., Tibbits, J., Tiwari, V., van Ex, F., Wulff, B. B. H., Whole-genome methylome:, Pozniak, C. J., Robinson, S. J., Sharpe, A. G., Cory, A., Histone mark analyses:, Benhamed, M., Paux, E., Bendahmane, A., Concia, L., Latrasse, D., BAC chromosome MTP IWGSC-Bayer Whole-Genome Profiling (WGP) tags:, Rogers, J., Jacobs, J., Alaux, M., Appels, R., Bartos, J., Bellec, A., Berges, H., Dolezel, J., Feuillet, C., Frenkel, Z., Gill, B., Korol, A., Letellier, T., Olsen, O.-A., Simkova, H., Singh, K., Valarik, M., van der Vossen, E., Vautrin, S., Weining, S., Chromosome LTC mapping and physical mapping quality control:, Korol, A., Frenkel, Z., Fahima, T., Glikson, V., Raats, D., Rogers, J., RH mapping:, Tiwari, V., Gill, B., Paux, E., Poland, J., Optical mapping:, Dolezel, J., Cihalikova, J., Simkova, H., Toegelova, H., Vrana, J., Recombination analyses:, Sourdille, P., Darrier, B., Gene family analyses:, Appels, R., Spannagl, M., Lang, D., Fischer, I., Ormanbekova, D., Prade, V., CBF gene family:, Barabaschi, D., Cattivelli, L., Dehydrin gene family:, Hernandez, P., Galvez, S., Budak, H., NLR gene family:, Steuernagel, B., Jones, J. D. G., Witek, K., Wulff, B. B. H., Yu, G., PPR gene family:, Small, I., Melonek, J., Zhou, R., Prolamin gene family:, Juhasz, A., Belova, T., Appels, R., Olsen, O.-A., WAK gene family:, Kanyuka, K., King, R., Stem solidness (SSt1) QTL team:, Nilsen, K., Walkowiak, S., Pozniak, C. J., Cuthbert, R., Datla, R., Knox, R., Wiebe, K., Xiang, D., Flowering locus C (FLC) gene team:, Rohde, A., Golds, T., Genome size analysis:, Dolezel, J., Cizkova, J., Tibbits, J., Micro; RNA and t; RNA annotation:, Budak, H., Akpinar, B. A., Biyiklioglu, S., Genetic maps and mapping:, Muehlbauer, G., Poland, J., Gao, L., Gutierrez-Gonzalez, J., NDaiye, A., BAC libraries and chromosome sorting:, Dolezel, J., Simkova, H., Cihalikova, J., Kubalakova, M., Safar, J., Vrana, J., BAC pooling, BAC library repository, and access:, Berges, H., Bellec, A., Vautrin, S., IWGSC sequence and data repository and access:, Alaux, M., Alfama, F., Adam-Blondon, A.-F., Flores, R., Guerche, C., Letellier, T., Loaec, M., Quesneville, H., Physical maps and BAC-based sequences:, 1; A BAC sequencing and assembly:, Pozniak, C. J., Sharpe, A. G., Walkowiak, S., Budak, H., Condie, J., Ens, J., Koh, C., Maclachlan, R., Tan, Y., Wicker, T., 1; B BAC sequencing and assembly:, Choulet, F., Paux, E., Alberti, A., Aury, J.-M., Balfourier, F., Barbe, V., Couloux, A., Cruaud, C., Labadie, K., Mangenot, S., Wincker, P., 1; D, 4; D, and 6; D physical mapping:, Gill, B., Kaur, G., Luo, M., Sehgal, S., 2; AL physical mapping:, Singh, K., Chhuneja, P., Gupta, O. P., Jindal, S., Kaur, P., Malik, P., Sharma, P., Yadav, B., 2; AS physical mapping:, Singh, N. K., Khurana, J., Chaudhary, C., Khurana, P., Kumar, V., Mahato, A., Mathur, S., Sevanthi, A., Sharma, N., Tomar, R. S., 2; B, 2; D, 4; B, 5; BL, and 5; DL IWGSC-Bayer Whole-Genome Profiling (WGP) physical maps:, Rogers, J., Jacobs, J., Alaux, M., Bellec, A., Berges, H., Dolezel, J., Feuillet, C., Frenkel, Z., Gill, B., Korol, A., van der Vossen, E., Vautrin, S., 3; AL physical mapping:, Gill, B., Kaur, G., Luo, M., Sehgal, S., 3; DS physical mapping and BAC sequencing and assembly:, Bartos, J., Holusova, K., Plihal, O., 3; DL BAC sequencing and assembly:, Clark, M. D., Heavens, D., Kettleborough, G., Wright, J., 4; A physical mapping, BAC sequencing, assembly, and annotation:, Valarik, M., Abrouk, M., Balcarkova, B., Holusova, K., Hu, Y., Luo, M., 5; BS BAC sequencing and assembly:, Salina, E., Ravin, N., Skryabin, K., Beletsky, A., Kadnikov, V., Mardanov, A., Nesterov, M., Rakitin, A., Sergeeva, E., 6; B BAC sequencing and assembly:, Handa, H., Kanamori, H., Katagiri, S., Kobayashi, F., Nasuda, S., Tanaka, T., Wu, J., 7; A physical mapping and BAC sequencing:, Appels, R., Hayden, M., Keeble-Gagnere, G., Rigault, P., Tibbits, J., 7; B physical mapping, BAC sequencing, and assembly:, Olsen, O.-A., Belova, T., Cattonaro, F., Jiumeng, M., Kugler, K., Mayer, K. F. X., Pfeifer, M., Sandve, S., Xun, X., Zhan, B., 7; DS BAC sequencing and assembly:, Simkova, H., Abrouk, M., Batley, J., Bayer, P. E., Edwards, D., Hayashi, S., Toegelova, H., Tulpova, Z., Visendi, P., 7; DL physical mapping and BAC sequencing:, Weining, S., Cui, L., Du, X., Feng, K., Nie, X., Tong, W., Wang, L., Figures:, Borrill, P., Gundlach, H., Galvez, S., Kaithakottil, G., Lang, D., Lux, T., Mascher, M., Ormanbekova, D., Prade, V., Ramirez-Gonzalez, R. H., Spannagl, M., Stein, N., Uauy, C., Venturini, L., Manuscript writing team:, Stein, N., Appels, R., Eversole, K., Rogers, J., Borrill, P., Cattivelli, L., Choulet, F., Hernandez, P., Kanyuka, K., Lang, D., Mascher, M., Nilsen, K., Paux, E., Pozniak, C. J., Ramirez-Gonzalez, R. H., Simkova, H., Small, I., Spannagl, M., Swarbreck, D., Uauy, C.
American Association for the Advancement of Science (AAAS)
Published 2018

The transcriptional landscape of polyploid wheat

Ramirez-Gonzalez, R. H., Borrill, P., Lang, D., Harrington, S. A., Brinton, J., Venturini, L., Davey, M., Jacobs, J., van Ex, F., Pasha, A., Khedikar, Y., Robinson, S. J., Cory, A. T., Florio, T., Concia, L., Juery, C., Schoonbeek, H., Steuernagel, B., Xiang, D., Ridout, C. J., Chalhoub, B., Mayer, K. F. X., Benhamed, M., Latrasse, D., Bendahmane, A., International Wheat Genome Sequencing Consortium, Wulff, B. B. H., Appels, R., Tiwari, V., Datla, R., Choulet, F., Pozniak, C. J., Provart, N. J., Sharpe, A. G., Paux, E., Spannagl, M., Bräutigam, A., Uauy, C., Korol, Sharpe, Juhasz, Rohde, Bellec, Distelfeld, Akpinar, Keller, Darrier, Gill, Chalhoub, Steuernagel, Feuillet, Chaudhary, Uauy, Pozniak, Ormanbekova, Xiang, Latrasse, Swarbreck, Barabaschi, Raats, Sergeeva, Salina, Paux, Cattonaro, Choulet, Kobayashi, Keeble-Gagnere, Kaur, Muehlbauer, Kettleborough, Yu, Simkova, Gundlach, Berges, Rimbert, Budak, Handa, Small, Bartos, Rogers, Dolezel, Keilwagen, Poland, Melonek, Jacobs, Wright, Jones, Gutierrez-Gonzalez, Eversole, Nilsen, Mayer, Kanyuka, Singh, Gao, Concia, Venturini, Cattivelli, Spannagl, Mascher, Hayden, Abrouk, Alaux, Luo, Valarik, Benhamed, Singh, Sharma, Guilhot, Ravin, Stein, Olsen, Gupta, Khurana, Chhuneja, Bayer, Borrill, Leroy, Rigault, Sourdille, Hernandez, Flores, Ramirez-Gonzalez, King, Knox, Appels, Zhou, Walkowiak, Galvez, Biyiklioglu, Nasuda, Sandve, Chalabi, Weining, Sehgal, Jindal, Belova, Letellier, Wicker, Tanaka, Fahima, Barbe, Tiwari, Kumar, Tan
American Association for the Advancement of Science (AAAS)
Published 2018